1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G270500.1

Sobic.003G270500.1


Description : farnesyl diphosphate synthase 1


Gene families : OG_01_0005649 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005649_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G270500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G270500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_193
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_227


Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process ISM GOs from InterProScan
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000092 Polyprenyl_synt Pfam 47 310
IPR000092 Polyprenyl_synt CDD 44 354
IPR033749 Polyprenyl_synt_CS ProSitePatterns 238 250
IPR008949 Isoprenoid_synthase_dom_sf Gene3D 9 355
IPR008949 Isoprenoid_synthase_dom_sf SUPERFAMILY 36 355
IPR039702 FPS1-like PANTHER 10 356
IPR033749 Polyprenyl_synt_CS ProSitePatterns 104 118

No CAZYmes available for this sequence

No external refs found!