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  5. Sobic.003G271400.1

Sobic.003G271400.1


Description : chloride channel E


Gene families : OG_01_0010165 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010165_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G271400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G271400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_199
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_196


Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity ISM GOs from InterProScan
BP GO:0006821 chloride transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014743 Cl-channel_core SUPERFAMILY 81 498
IPR000644 CBS_dom Pfam 652 695
IPR001807 Cl-channel_volt-gated PRINTS 226 245
IPR001807 Cl-channel_volt-gated PRINTS 448 464
IPR001807 Cl-channel_volt-gated PRINTS 466 485
IPR001807 Cl-channel_volt-gated PRINTS 175 194
IPR001807 Cl-channel_volt-gated PRINTS 403 423
IPR001807 Cl-channel_volt-gated Pfam 168 497

No CAZYmes available for this sequence

No external refs found!