1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G274400.1

Sobic.003G274400.1


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0011306 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011306_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G274400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G274400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_149
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_168


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1 441
IPR001680 WD40_rpt ProSiteProfiles 236 278
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 109 426
IPR022052 Histone-bd_RBBP4_N Pfam 13 78
IPR001680 WD40_rpt ProSiteProfiles 330 363
IPR020472 G-protein_beta_WD-40_rep PRINTS 301 315
IPR020472 G-protein_beta_WD-40_rep PRINTS 350 364
IPR020472 G-protein_beta_WD-40_rep PRINTS 182 196
IPR001680 WD40_rpt ProSiteProfiles 281 314
IPR001680 WD40_rpt Pfam 325 363
IPR001680 WD40_rpt Pfam 233 269
IPR001680 WD40_rpt Pfam 282 314
IPR001680 WD40_rpt Pfam 161 195
IPR001680 WD40_rpt SMART 155 195
IPR001680 WD40_rpt SMART 323 363
IPR001680 WD40_rpt SMART 229 269
IPR001680 WD40_rpt SMART 376 423
IPR001680 WD40_rpt SMART 274 314

No CAZYmes available for this sequence

No external refs found!