Sobic.003G275700.5

Description : myosin XI A

Gene families : OG_01_0000106 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000106_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G275700.5
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G275700.5
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_270
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007015	actin filament organization	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016459	myosin complex	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036018	MYSc_Myo11	CDD	76	719
IPR000048	IQ_motif_EF-hand-BS	ProSiteProfiles	734	761
IPR001609	Myosin_head_motor_dom	ProSiteProfiles	62	731
IPR001609	Myosin_head_motor_dom	SMART	56	732
IPR000048	IQ_motif_EF-hand-BS	ProSiteProfiles	853	882
IPR002710	Dilute_dom	SMART	2205	2312
IPR000048	IQ_motif_EF-hand-BS	ProSiteProfiles	782	811
IPR036961	Kinesin_motor_dom_sf	Gene3D	65	661
IPR001609	Myosin_head_motor_dom	Pfam	64	719
IPR004009	Myosin_N	ProSiteProfiles	8	57
IPR000048	IQ_motif_EF-hand-BS	SMART	733	755
IPR000048	IQ_motif_EF-hand-BS	SMART	781	803
IPR000048	IQ_motif_EF-hand-BS	SMART	852	874
IPR000048	IQ_motif_EF-hand-BS	SMART	804	826
IPR000048	IQ_motif_EF-hand-BS	SMART	756	778
IPR000048	IQ_motif_EF-hand-BS	SMART	829	851
IPR004009	Myosin_N	Pfam	10	52
IPR002710	Dilute_dom	Pfam	2205	2309
IPR027417	P-loop_NTPase	SUPERFAMILY	35	784
IPR037975	MyosinXI_CBD	CDD	1986	2353
IPR027417	P-loop_NTPase	SUPERFAMILY	783	883
IPR002710	Dilute_dom	ProSiteProfiles	2027	2330
IPR000048	IQ_motif_EF-hand-BS	ProSiteProfiles	805	834
IPR001609	Myosin_head_motor_dom	PRINTS	92	111
IPR001609	Myosin_head_motor_dom	PRINTS	429	457
IPR001609	Myosin_head_motor_dom	PRINTS	149	174
IPR001609	Myosin_head_motor_dom	PRINTS	482	510
IPR001609	Myosin_head_motor_dom	PRINTS	196	223

No CAZYmes available for this sequence

External Links

No external refs found!