Sobic.003G277400.1

Description : violaxanthin de-epoxidase-related

Gene families : OG_01_0008853 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008853_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G277400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G277400.1	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_2

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010028	xanthophyll cycle	ISM	GOs from InterProScan
BP	GO:0016108	tetraterpenoid metabolic process	None	Extended
BP	GO:0016116	carotenoid metabolic process	None	Extended
BP	GO:0016122	xanthophyll metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046422	violaxanthin de-epoxidase activity	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR010788	VDE_dom	Pfam	258	508
IPR012674	Calycin	Gene3D	357	516
IPR044682	VDE	PANTHER	20	530

No CAZYmes available for this sequence

External Links

No external refs found!