Sobic.003G280500.1

Description : Ribosomal protein S5/Elongation factor G/III/V family protein

Gene families : OG_01_0001427 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001427_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G280500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G280500.1	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_79

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000640	EFG_V-like	Pfam	725	813
IPR000795	T_Tr_GTP-bd_dom	PRINTS	21	34
IPR000795	T_Tr_GTP-bd_dom	PRINTS	96	106
IPR000795	T_Tr_GTP-bd_dom	PRINTS	65	73
IPR000795	T_Tr_GTP-bd_dom	PRINTS	148	157
IPR000795	T_Tr_GTP-bd_dom	PRINTS	112	123
IPR005517	Transl_elong_EFG/EF2_IV	Pfam	612	722
IPR031157	G_TR_CS	ProSitePatterns	58	73
IPR000640	EFG_V-like	SMART	725	814
IPR005517	Transl_elong_EFG/EF2_IV	SMART	607	723
IPR027417	P-loop_NTPase	SUPERFAMILY	5	340
IPR035647	EFG_III/V	SUPERFAMILY	484	560
IPR000795	T_Tr_GTP-bd_dom	Pfam	17	341
IPR041095	EFG_II	Pfam	487	549
IPR000795	T_Tr_GTP-bd_dom	ProSiteProfiles	17	343
IPR005225	Small_GTP-bd_dom	TIGRFAM	19	166
IPR014721	Ribsml_uS5_D2-typ_fold_subgr	Gene3D	570	723
IPR027417	P-loop_NTPase	Gene3D	4	232
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	562	727
IPR035647	EFG_III/V	SUPERFAMILY	728	829
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	341	475
IPR004161	EFTu-like_2	Pfam	393	468

No CAZYmes available for this sequence

External Links

No external refs found!