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  5. Sobic.003G313900.1

Sobic.003G313900.1


Description : Mannose-binding lectin superfamily protein


Gene families : OG_01_0001148 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001148_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G313900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G313900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_47
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_589


Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001229 Jacalin-like_lectin_dom ProSiteProfiles 426 567
IPR036404 Jacalin-like_lectin_dom_sf SUPERFAMILY 11 150
IPR033734 Jacalin-like_lectin_dom_plant CDD 440 566
IPR001229 Jacalin-like_lectin_dom ProSiteProfiles 11 152
IPR001229 Jacalin-like_lectin_dom ProSiteProfiles 239 381
IPR001229 Jacalin-like_lectin_dom Pfam 250 379
IPR001229 Jacalin-like_lectin_dom Pfam 437 566
IPR001229 Jacalin-like_lectin_dom Pfam 22 150
IPR033734 Jacalin-like_lectin_dom_plant CDD 22 150
IPR036404 Jacalin-like_lectin_dom_sf SUPERFAMILY 425 565
IPR001229 Jacalin-like_lectin_dom SMART 250 381
IPR001229 Jacalin-like_lectin_dom SMART 437 567
IPR001229 Jacalin-like_lectin_dom SMART 22 152
IPR033734 Jacalin-like_lectin_dom_plant CDD 250 379
IPR036404 Jacalin-like_lectin_dom_sf Gene3D 2 151
IPR036404 Jacalin-like_lectin_dom_sf Gene3D 228 379
IPR036404 Jacalin-like_lectin_dom_sf Gene3D 420 566
IPR036404 Jacalin-like_lectin_dom_sf SUPERFAMILY 235 379

No CAZYmes available for this sequence

No external refs found!