1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G317200.1

Sobic.003G317200.1


Description : Vacuolar protein sorting-associated protein VPS28 family protein


Gene families : OG_01_0014451 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014451_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G317200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G317200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_188
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166


Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex ISM GOs from InterProScan
BP GO:0032509 endosome transport via multivesicular body sorting pathway ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR038358 VPS28_N_sf Gene3D 3 96
IPR037206 VPS28_C_sf Gene3D 109 209
IPR007143 Vps28 PIRSF 1 209
IPR017898 VPS28_N ProSiteProfiles 1 98
IPR037206 VPS28_C_sf SUPERFAMILY 114 208
IPR007143 Vps28 Pfam 19 208
IPR007143 Vps28 PANTHER 1 212
IPR017899 VPS28_C ProSiteProfiles 112 209
IPR037202 ESCRT_assembly_dom SUPERFAMILY 2 96

No CAZYmes available for this sequence

No external refs found!