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  5. Sobic.003G319100.1

Sobic.003G319100.1


Description : frataxin homolog


Gene families : OG_01_0003106 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003106_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G319100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G319100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_147
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_224


Type GO Term Name Evidence Source
MF GO:0004322 ferroxidase activity ISM GOs from InterProScan
CC GO:0005739 mitochondrion ISM GOs from InterProScan
MF GO:0008199 ferric iron binding ISM GOs from InterProScan
BP GO:0016226 iron-sulfur cluster assembly ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020895 Frataxin_CS ProSitePatterns 140 154
IPR002908 Frataxin/CyaY ProSiteProfiles 88 196
IPR002908 Frataxin/CyaY Pfam 88 195
IPR002908 Frataxin/CyaY PANTHER 1 198
IPR002908 Frataxin/CyaY PRINTS 88 106
IPR002908 Frataxin/CyaY PRINTS 126 141
IPR002908 Frataxin/CyaY PRINTS 141 156
IPR036524 Frataxin/CyaY_sf SUPERFAMILY 82 196
IPR002908 Frataxin/CyaY SMART 88 198
IPR036524 Frataxin/CyaY_sf Gene3D 81 198
IPR002908 Frataxin/CyaY TIGRFAM 90 197
IPR017789 Frataxin TIGRFAM 92 189

No CAZYmes available for this sequence

No external refs found!