Sobic.003G340600.1

Description : ENTH/VHS/GAT family protein

Gene families : OG_01_0009559 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009559_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G340600.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G340600.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_309
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_46

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005543	phospholipid binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
MF	GO:0032182	ubiquitin-like protein binding	None	Extended
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	None	Extended
BP	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
MF	GO:0035091	phosphatidylinositol binding	ISM	GOs from InterProScan
MF	GO:0043130	ubiquitin binding	ISM	GOs from InterProScan
BP	GO:0043328	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	ISM	GOs from InterProScan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0045324	late endosome to vacuole transport	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072665	protein localization to vacuole	None	Extended
BP	GO:0072666	establishment of protein localization to vacuole	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002014	VHS_dom	ProSiteProfiles	25	154
IPR002014	VHS_dom	Pfam	18	135
IPR004152	GAT_dom	Pfam	206	280
IPR008942	ENTH_VHS	Gene3D	8	171
IPR044836	TOL_plant	PANTHER	10	620
IPR004152	GAT_dom	ProSiteProfiles	191	280
IPR008942	ENTH_VHS	SUPERFAMILY	20	156
IPR038425	GAT_sf	Gene3D	193	283
IPR002014	VHS_dom	SMART	18	150

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.003G340600.1

Expression Profile

Co-expression Networks

Functional Annotation