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  5. Sobic.003G350400.1

Sobic.003G350400.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0017045 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017045_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G350400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G350400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_181
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_91


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin SMART 33 251
IPR001938 Thaumatin PIRSF 2 251
IPR001938 Thaumatin Pfam 37 250
IPR001938 Thaumatin PRINTS 32 44
IPR001938 Thaumatin PRINTS 93 122
IPR001938 Thaumatin PRINTS 81 92
IPR001938 Thaumatin PRINTS 131 147
IPR001938 Thaumatin PRINTS 241 250
IPR001938 Thaumatin PANTHER 10 251
IPR037176 Osmotin/thaumatin-like_sf Gene3D 31 250
IPR001938 Thaumatin ProSiteProfiles 32 251
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 32 250
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 252 2.7e-78 37 250
No external refs found!