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  5. Sobic.003G360500.1

Sobic.003G360500.1


Description : plant glycogenin-like starch initiation protein 1


Gene families : OG_01_0055174 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0055174_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G360500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G360500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_158
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_222


Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR029044 Nucleotide-diphossugar_trans Gene3D 329 576
IPR002495 Glyco_trans_8 Pfam 336 542
IPR029044 Nucleotide-diphossugar_trans SUPERFAMILY 331 574
HMM Family HMM Length Query Length e-Value Query Start Query End
GT8 257 630 2.1e-36 329 542
No external refs found!