1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.003G367650.1

Sobic.003G367650.1


Description : pyrophosphorylase 3


Gene families : OG_01_0000084 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000084_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G367650.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G367650.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_111


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
MF GO:0004427 inorganic diphosphate phosphatase activity ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006796 phosphate-containing compound metabolic process ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008162 Pyrophosphatase Pfam 73 109
IPR008162 Pyrophosphatase Pfam 109 155
IPR036649 Pyrophosphatase_sf SUPERFAMILY 30 160
IPR036649 Pyrophosphatase_sf Gene3D 110 161
IPR036649 Pyrophosphatase_sf Gene3D 32 72
IPR036649 Pyrophosphatase_sf Gene3D 73 109
IPR008162 Pyrophosphatase PANTHER 3 75
IPR008162 Pyrophosphatase PANTHER 110 165
IPR008162 Pyrophosphatase PANTHER 75 109

No CAZYmes available for this sequence

No external refs found!