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Description : CDC27 family protein
Gene families : OG_01_0003216 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003216_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G388000.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G388000.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_336 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_152 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 34 | 490 |
| IPR019734 | TPR_repeat | Pfam | 566 | 592 |
| IPR019734 | TPR_repeat | Pfam | 103 | 132 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 625 | 728 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 527 | 560 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 527 | 731 |
| IPR019734 | TPR_repeat | SMART | 697 | 730 |
| IPR019734 | TPR_repeat | SMART | 527 | 560 |
| IPR019734 | TPR_repeat | SMART | 101 | 134 |
| IPR019734 | TPR_repeat | SMART | 595 | 628 |
| IPR019734 | TPR_repeat | SMART | 459 | 492 |
| IPR019734 | TPR_repeat | SMART | 561 | 594 |
| IPR019734 | TPR_repeat | SMART | 629 | 662 |
| IPR019734 | TPR_repeat | SMART | 663 | 696 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 595 | 628 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 697 | 730 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 629 | 662 |
| IPR001440 | TPR_1 | Pfam | 596 | 627 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 1 | 156 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 101 | 134 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 419 | 490 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 561 | 594 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 492 | 624 |
No CAZYmes available for this sequence
| No external refs found! |