Sobic.003G389000.1

Description : beta glucosidase 42

Gene families : OG_01_0007263 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007263_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G389000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G389000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_144

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008422	beta-glucosidase activity	ISM	GOs from InterProScan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009251	glucan catabolic process	None	Extended
MF	GO:0015926	glucosidase activity	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030245	cellulose catabolic process	ISM	GOs from InterProScan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051275	beta-glucan catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001360	Glyco_hydro_1	PANTHER	148	604
IPR001360	Glyco_hydro_1	PRINTS	524	535
IPR001360	Glyco_hydro_1	PRINTS	569	581
IPR001360	Glyco_hydro_1	PRINTS	545	562
IPR001360	Glyco_hydro_1	PRINTS	426	440
IPR001360	Glyco_hydro_1	PRINTS	501	509
IPR017736	Glyco_hydro_1_beta-glucosidase	TIGRFAM	140	592
IPR033132	Glyco_hydro_1_N_CS	ProSitePatterns	144	158
IPR001360	Glyco_hydro_1	Pfam	138	597
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	135	597

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH1	429	609	2e-174	137	597

External Links

No external refs found!