Sobic.003G427600.1

Description : villin 2

Gene families : OG_01_0001293 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001293_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G427600.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G427600.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_326
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_69

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	ISM	GOs from InterProScan
BP	GO:0007015	actin filament organization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0051015	actin filament binding	ISM	GOs from InterProScan
BP	GO:0051017	actin filament bundle assembly	ISM	GOs from InterProScan
BP	GO:0061572	actin filament bundle organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003128	Villin_headpiece	SMART	948	983
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	132	247
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	617	737
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	4	131
IPR003128	Villin_headpiece	ProSiteProfiles	918	983
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	391	520
IPR036886	Villin_headpiece_dom_sf	SUPERFAMILY	921	983
IPR003128	Villin_headpiece	Pfam	948	983
IPR007122	Villin/Gelsolin	SMART	18	116
IPR007122	Villin/Gelsolin	SMART	251	343
IPR007122	Villin/Gelsolin	SMART	520	609
IPR007122	Villin/Gelsolin	SMART	138	233
IPR007122	Villin/Gelsolin	SMART	626	722
IPR007122	Villin/Gelsolin	SMART	394	492
IPR007123	Gelsolin-like_dom	Pfam	410	485
IPR007123	Gelsolin-like_dom	Pfam	645	716
IPR007123	Gelsolin-like_dom	Pfam	28	110
IPR007123	Gelsolin-like_dom	Pfam	270	336
IPR007123	Gelsolin-like_dom	Pfam	536	603
IPR007123	Gelsolin-like_dom	Pfam	148	219
IPR007122	Villin/Gelsolin	PRINTS	595	614
IPR007122	Villin/Gelsolin	PRINTS	648	670
IPR007122	Villin/Gelsolin	PRINTS	677	696
IPR007122	Villin/Gelsolin	PRINTS	322	343
IPR007122	Villin/Gelsolin	PRINTS	535	555
IPR007122	Villin/Gelsolin	PRINTS	413	429
IPR007122	Villin/Gelsolin	PRINTS	439	457
IPR007122	Villin/Gelsolin	PRINTS	472	492
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	521	615
IPR007122	Villin/Gelsolin	PANTHER	1	983
IPR036886	Villin_headpiece_dom_sf	Gene3D	906	983
IPR029006	ADF-H/Gelsolin-like_dom_sf	Gene3D	248	351

No CAZYmes available for this sequence

External Links

No external refs found!