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  5. Sobic.003G444900.1

Sobic.003G444900.1


Description : XB3 ortholog 1 in Arabidopsis thaliana


Gene families : OG_01_0000649 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000649_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.003G444900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.003G444900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_106


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt ProSiteProfiles 204 236
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 17 260
IPR002110 Ankyrin_rpt Pfam 18 119
IPR002110 Ankyrin_rpt Pfam 124 192
IPR036770 Ankyrin_rpt-contain_sf Gene3D 121 203
IPR036770 Ankyrin_rpt-contain_sf Gene3D 8 120
IPR001841 Znf_RING ProSiteProfiles 345 394
IPR002110 Ankyrin_rpt ProSiteProfiles 167 199
IPR002110 Ankyrin_rpt SMART 122 152
IPR002110 Ankyrin_rpt SMART 88 117
IPR002110 Ankyrin_rpt SMART 204 233
IPR002110 Ankyrin_rpt SMART 45 76
IPR002110 Ankyrin_rpt SMART 167 196
IPR002110 Ankyrin_rpt ProSiteProfiles 88 120
IPR013083 Znf_RING/FYVE/PHD Gene3D 317 405
IPR002110 Ankyrin_rpt Pfam 205 235
IPR036770 Ankyrin_rpt-contain_sf Gene3D 204 266

No CAZYmes available for this sequence

No external refs found!