Sobic.004G008000.2

Description : NOP56-like pre RNA processing ribonucleoprotein

Gene families : OG_01_0000371 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000371_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G008000.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G008000.2	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_68

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	None	Extended
MF	GO:0030515	snoRNA binding	ISM	GOs from InterProScan
CC	GO:0030684	preribosome	None	Extended
CC	GO:0031428	box C/D RNP complex	ISM	GOs from InterProScan
CC	GO:0032040	small-subunit processome	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045056	Nop56/Nop58	PANTHER	18	187
IPR012974	NOP58/56_N	Pfam	25	84

No CAZYmes available for this sequence

External Links

No external refs found!