1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G011201.1

Sobic.004G011201.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0016162 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016162_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G011201.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G011201.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_160


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR044616 RUP1/2 PANTHER 24 448
IPR001680 WD40_rpt SMART 79 118
IPR001680 WD40_rpt SMART 330 371
IPR001680 WD40_rpt SMART 268 309
IPR001680 WD40_rpt SMART 178 220
IPR001680 WD40_rpt SMART 136 177
IPR001680 WD40_rpt SMART 224 263
IPR001680 WD40_rpt SMART 396 443
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 80 446
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 70 444
IPR001680 WD40_rpt ProSiteProfiles 195 220
IPR001680 WD40_rpt ProSiteProfiles 275 318
IPR001680 WD40_rpt ProSiteProfiles 86 121
IPR001680 WD40_rpt Pfam 85 118
IPR001680 WD40_rpt Pfam 190 220

No CAZYmes available for this sequence

No external refs found!