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  5. Sobic.004G025100.1

Sobic.004G025100.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0014217 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014217_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G025100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G025100.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_18


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 192 308
IPR002885 Pentatricopeptide_rpt Pfam 242 288
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 242 276
IPR002885 Pentatricopeptide_rpt TIGRFAM 244 278
IPR011990 TPR-like_helical_dom_sf Gene3D 71 191

No CAZYmes available for this sequence

No external refs found!