Sobic.004G057100.1

Description : tubulin folding cofactor E / Pfifferling (PFI)

Gene families : OG_01_0001224 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001224_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G057100.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G057100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_195
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_231

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006457	protein folding	ISM	GOs from InterProScan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
MF	GO:0043014	alpha-tubulin binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR029071	Ubiquitin-like_domsf	SUPERFAMILY	443	531
IPR044079	Ubl_TBCE	CDD	449	531
IPR032675	LRR_dom_sf	Gene3D	87	221
IPR001611	Leu-rich_rpt	ProSiteProfiles	160	181
IPR000938	CAP-Gly_domain	Pfam	10	76
IPR044994	TBCE	PANTHER	8	532
IPR036859	CAP-Gly_dom_sf	SUPERFAMILY	3	147
IPR000938	CAP-Gly_domain	SMART	10	79
IPR000938	CAP-Gly_domain	ProSiteProfiles	30	74
IPR032675	LRR_dom_sf	Gene3D	226	403
IPR036859	CAP-Gly_dom_sf	Gene3D	2	83
IPR001611	Leu-rich_rpt	ProSiteProfiles	322	343

No CAZYmes available for this sequence

External Links

No external refs found!