Sobic.004G060400.1

Description : ENTH/ANTH/VHS superfamily protein

Gene families : OG_01_0002609 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002609_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G060400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G060400.1	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_45

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005543	phospholipid binding	ISM	GOs from InterProScan
MF	GO:0005545	1-phosphatidylinositol binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030100	regulation of endocytosis	None	Extended
CC	GO:0030135	coated vesicle	None	Extended
CC	GO:0030136	clathrin-coated vesicle	ISM	GOs from InterProScan
MF	GO:0030276	clathrin binding	ISM	GOs from InterProScan
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
MF	GO:0035091	phosphatidylinositol binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0048259	regulation of receptor-mediated endocytosis	None	Extended
BP	GO:0048268	clathrin coat assembly	ISM	GOs from InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0060627	regulation of vesicle-mediated transport	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:2000369	regulation of clathrin-dependent endocytosis	ISM	GOs from InterProScan

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR014712	ANTH_dom_sf	Gene3D	170	343
IPR008942	ENTH_VHS	Gene3D	4	158
IPR013809	ENTH	ProSiteProfiles	21	158
IPR045192	AP180-like	PANTHER	3	558
IPR013809	ENTH	SMART	27	158
IPR011417	ANTH_dom	Pfam	28	306
IPR008942	ENTH_VHS	SUPERFAMILY	28	159

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.004G060400.1

Expression Profile

Co-expression Networks

Functional Annotation