Sobic.004G067700.1

Description : zinc finger (C3HC4-type RING finger) family protein

Gene families : OG_01_0013640 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013640_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G067700.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G067700.1	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_157

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011422	BRAP2/ETP1_RRM	Pfam	59	155
IPR001841	Znf_RING	ProSiteProfiles	168	208
IPR013083	Znf_RING/FYVE/PHD	Gene3D	210	289
IPR001607	Znf_UBP	Pfam	219	278
IPR001841	Znf_RING	Pfam	167	208
IPR013083	Znf_RING/FYVE/PHD	Gene3D	145	209
IPR001607	Znf_UBP	ProSiteProfiles	217	278
IPR001607	Znf_UBP	SMART	218	267
IPR001841	Znf_RING	SMART	168	207

No CAZYmes available for this sequence

External Links

No external refs found!