Sobic.004G078000.1

Description : Citrate synthase family protein

Gene families : OG_01_0004422 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004422_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G078000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G078000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_168

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004108	citrate (Si)-synthase activity	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006101	citrate metabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0036440	citrate synthase activity	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072350	tricarboxylic acid metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019810	Citrate_synthase_AS	ProSitePatterns	350	362
IPR016143	Citrate_synth-like_sm_a-sub	Gene3D	310	424
IPR002020	Citrate_synthase	Pfam	78	456
IPR016142	Citrate_synth-like_lrg_a-sub	Gene3D	45	456
IPR010109	Citrate_synthase_euk	TIGRFAM	38	463
IPR002020	Citrate_synthase	PRINTS	343	363
IPR002020	Citrate_synthase	PRINTS	283	311
IPR002020	Citrate_synthase	PRINTS	260	275
IPR002020	Citrate_synthase	PRINTS	404	420
IPR002020	Citrate_synthase	PRINTS	212	225
IPR002020	Citrate_synthase	PRINTS	425	439
IPR002020	Citrate_synthase	PANTHER	1	470
IPR036969	Citrate_synthase_sf	SUPERFAMILY	40	467

No CAZYmes available for this sequence

External Links

No external refs found!