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  5. Sobic.004G086700.1

Sobic.004G086700.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0001167 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001167_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G086700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G086700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_72
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_122


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 98 139
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 9 321
IPR020472 G-protein_beta_WD-40_rep PRINTS 76 90
IPR020472 G-protein_beta_WD-40_rep PRINTS 285 299
IPR020472 G-protein_beta_WD-40_rep PRINTS 117 131
IPR001680 WD40_rpt Pfam 54 89
IPR001680 WD40_rpt Pfam 179 214
IPR001680 WD40_rpt Pfam 94 130
IPR001680 WD40_rpt Pfam 263 297
IPR001680 WD40_rpt ProSiteProfiles 266 299
IPR001680 WD40_rpt SMART 217 256
IPR001680 WD40_rpt SMART 92 130
IPR001680 WD40_rpt SMART 177 214
IPR001680 WD40_rpt SMART 50 89
IPR001680 WD40_rpt SMART 259 298
IPR001680 WD40_rpt SMART 5 47
IPR001680 WD40_rpt SMART 134 174
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 4 301
IPR001680 WD40_rpt ProSiteProfiles 57 98

No CAZYmes available for this sequence

No external refs found!