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  5. Sobic.004G089300.2

Sobic.004G089300.2


Description : ABC2 homolog 6


Gene families : OG_01_0000078 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000078_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G089300.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G089300.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_191
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_172


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
MF GO:0140359 ABC-type transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003439 ABC_transporter-like_ATP-bd ProSiteProfiles 395 632
IPR003439 ABC_transporter-like_ATP-bd Pfam 417 561
IPR017871 ABC_transporter-like_CS ProSitePatterns 534 548
IPR027417 P-loop_NTPase Gene3D 385 657
IPR026082 ABCA PANTHER 45 712
IPR027417 P-loop_NTPase SUPERFAMILY 396 623
IPR003593 AAA+_ATPase SMART 425 608

No CAZYmes available for this sequence

No external refs found!