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  5. Sobic.004G094000.1

Sobic.004G094000.1


Description : cytokinin oxidase 5


Gene families : OG_01_0008820 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008820_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G094000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G094000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_48


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
BP GO:0009690 cytokinin metabolic process ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0019139 cytokinin dehydrogenase activity ISM GOs from InterProScan
MF GO:0050660 flavin adenine dinucleotide binding ISM GOs from InterProScan
MF GO:0071949 FAD binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015345 Cytokinin_DH_FAD/cytokin-bd Pfam 244 522
IPR016167 FAD-bd_PCMH_sub1 Gene3D 47 522
IPR016166 FAD-bd_PCMH ProSiteProfiles 62 243
IPR036318 FAD-bd_PCMH-like_sf SUPERFAMILY 42 242
IPR016164 FAD-linked_Oxase-like_C SUPERFAMILY 244 522
IPR006094 Oxid_FAD_bind_N Pfam 66 212
IPR016169 FAD-bd_PCMH_sub2 Gene3D 117 245
IPR016170 Cytok_DH_C_sf Gene3D 246 481
HMM Family HMM Length Query Length e-Value Query Start Query End
AA7 458 535 6.7e-29 57 257
No external refs found!