Sobic.004G113500.2

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0003759 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003759_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G113500.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G113500.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_246
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_109

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	ISM	GOs from InterProScan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045055	DNA2/NAM7-like	PANTHER	26	222
IPR027417	P-loop_NTPase	Gene3D	662	729
IPR027417	P-loop_NTPase	Gene3D	250	591
IPR041679	DNA2/NAM7-like_C	Pfam	571	657
IPR027417	P-loop_NTPase	Gene3D	592	661
IPR041679	DNA2/NAM7-like_C	CDD	594	713
IPR041677	DNA2/NAM7_AAA_11	Pfam	250	563
IPR045055	DNA2/NAM7-like	PANTHER	261	659
IPR045055	DNA2/NAM7-like	PANTHER	664	727
IPR027417	P-loop_NTPase	SUPERFAMILY	261	698

No CAZYmes available for this sequence

External Links

No external refs found!