Sobic.004G148300.1

Description : RmlC-like cupins superfamily protein

Gene families : OG_01_0001095 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001095_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G148300.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G148300.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_258
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_45

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030145	manganese ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006045	Cupin_1	Pfam	64	208
IPR014710	RmlC-like_jellyroll	Gene3D	22	209
IPR001929	Germin	PRINTS	174	189
IPR001929	Germin	PRINTS	109	129
IPR001929	Germin	PRINTS	141	161
IPR019780	Germin_Mn-BS	ProSitePatterns	104	117
IPR006045	Cupin_1	SMART	60	211
IPR011051	RmlC_Cupin_sf	SUPERFAMILY	53	207

No CAZYmes available for this sequence

External Links

No external refs found!