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  5. Sobic.004G148600.1

Sobic.004G148600.1


Description : ankyrin repeat family protein


Gene families : OG_01_0021405 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0021405_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G148600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G148600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_36
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_112


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf Gene3D 146 211
IPR036770 Ankyrin_rpt-contain_sf Gene3D 36 145
IPR011990 TPR-like_helical_dom_sf Gene3D 356 469
IPR019734 TPR_repeat SMART 425 458
IPR019734 TPR_repeat SMART 357 390
IPR002110 Ankyrin_rpt ProSiteProfiles 179 207
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 42 298
IPR019734 TPR_repeat ProSiteProfiles 425 458
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 358 469
IPR002110 Ankyrin_rpt SMART 243 272
IPR002110 Ankyrin_rpt SMART 212 241
IPR002110 Ankyrin_rpt SMART 80 110
IPR002110 Ankyrin_rpt SMART 114 143
IPR002110 Ankyrin_rpt SMART 276 308
IPR002110 Ankyrin_rpt SMART 179 208
IPR002110 Ankyrin_rpt SMART 147 176
IPR036770 Ankyrin_rpt-contain_sf Gene3D 212 298
IPR002110 Ankyrin_rpt ProSiteProfiles 243 275
IPR002110 Ankyrin_rpt ProSiteProfiles 147 179
IPR002110 Ankyrin_rpt Pfam 44 141
IPR002110 Ankyrin_rpt Pfam 183 239
IPR002110 Ankyrin_rpt Pfam 148 178
IPR002110 Ankyrin_rpt Pfam 246 274
IPR002110 Ankyrin_rpt ProSiteProfiles 114 146

No CAZYmes available for this sequence

No external refs found!