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  5. Sobic.004G148900.2

Sobic.004G148900.2


Description : ankyrin repeat family protein


Gene families : OG_01_0021405 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0021405_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G148900.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G148900.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_174
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_157


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt ProSiteProfiles 48 80
IPR011990 TPR-like_helical_dom_sf Gene3D 234 347
IPR019734 TPR_repeat ProSiteProfiles 303 336
IPR002110 Ankyrin_rpt ProSiteProfiles 144 176
IPR002110 Ankyrin_rpt SMART 80 109
IPR002110 Ankyrin_rpt SMART 48 77
IPR002110 Ankyrin_rpt SMART 15 44
IPR002110 Ankyrin_rpt SMART 113 142
IPR002110 Ankyrin_rpt SMART 144 173
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 236 346
IPR002110 Ankyrin_rpt ProSiteProfiles 15 43
IPR002110 Ankyrin_rpt PRINTS 96 110
IPR002110 Ankyrin_rpt PRINTS 49 64
IPR002110 Ankyrin_rpt Pfam 2 76
IPR036770 Ankyrin_rpt-contain_sf Gene3D 1 198
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 6 199
IPR002110 Ankyrin_rpt ProSiteProfiles 80 112
IPR019734 TPR_repeat SMART 235 268
IPR019734 TPR_repeat SMART 303 336

No CAZYmes available for this sequence

No external refs found!