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  5. Sobic.004G158400.1

Sobic.004G158400.1


Description : MEI2-like protein 1


Gene families : OG_01_0005980 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005980_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G158400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G158400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_272
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_175


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 354 427
IPR034453 MEI2-like_RRM1 CDD 268 344
IPR035979 RBD_domain_sf SUPERFAMILY 825 909
IPR035979 RBD_domain_sf SUPERFAMILY 266 424
IPR000504 RRM_dom Pfam 271 335
IPR000504 RRM_dom Pfam 356 421
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 788 907
IPR000504 RRM_dom ProSiteProfiles 269 342
IPR034454 MEI2-like_RRM3 CDD 826 911
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 354 446
IPR007201 Mei2-like_Rrm_C Pfam 823 919
IPR000504 RRM_dom SMART 270 338
IPR000504 RRM_dom SMART 355 423
IPR000504 RRM_dom SMART 825 901
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 256 353

No CAZYmes available for this sequence

No external refs found!