Sobic.004G168900.2

Description : Ribosomal protein S5/Elongation factor G/III/V family protein

Gene families : OG_01_0007644 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007644_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G168900.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G168900.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_228
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_114

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000640	EFG_V-like	SMART	740	829
IPR035647	EFG_III/V	SUPERFAMILY	397	472
IPR035647	EFG_III/V	SUPERFAMILY	743	839
IPR009000	Transl_B-barrel_sf	SUPERFAMILY	254	394
IPR004161	EFTu-like_2	Pfam	303	382
IPR027417	P-loop_NTPase	SUPERFAMILY	1	212
IPR014721	Ribsml_uS5_D2-typ_fold_subgr	Gene3D	493	737
IPR000640	EFG_V-like	Pfam	741	825
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	474	742

No CAZYmes available for this sequence

External Links

No external refs found!