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  5. Sobic.004G175900.2

Sobic.004G175900.2


Description : SecY protein transport family protein


Gene families : OG_01_0028082 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0028082_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G175900.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G175900.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_232
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_222


Type GO Term Name Evidence Source
BP GO:0015031 protein transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR030659 SecY_CS ProSitePatterns 79 98
IPR002208 SecY/SEC61-alpha PANTHER 6 407
IPR023201 SecY_dom_sf SUPERFAMILY 10 408
IPR019561 Translocon_Sec61/SecY_plug_dom Pfam 44 78
IPR023201 SecY_dom_sf Gene3D 9 412
IPR002208 SecY/SEC61-alpha PIRSF 9 412
IPR002208 SecY/SEC61-alpha Pfam 79 409

No CAZYmes available for this sequence

No external refs found!