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  5. Sobic.004G180900.3

Sobic.004G180900.3


Description : Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein


Gene families : OG_01_0004182 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004182_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G180900.3
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G180900.3
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_218
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_116


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036875 Znf_CCHC_sf SUPERFAMILY 240 270
IPR006568 PSP_pro-rich SMART 304 358
IPR006568 PSP_pro-rich Pfam 308 345
IPR001878 Znf_CCHC ProSiteProfiles 250 266

No CAZYmes available for this sequence

No external refs found!