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  5. Sobic.004G186900.1

Sobic.004G186900.1


Description : RNA-binding protein 47C\'


Gene families : OG_01_0006848 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006848_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G186900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G186900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_74
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_95


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 108 188
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 191 290
IPR000504 RRM_dom ProSiteProfiles 109 189
IPR000504 RRM_dom SMART 304 371
IPR000504 RRM_dom SMART 203 277
IPR000504 RRM_dom SMART 110 185
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 291 408
IPR035979 RBD_domain_sf SUPERFAMILY 74 189
IPR000504 RRM_dom ProSiteProfiles 303 375
IPR035979 RBD_domain_sf SUPERFAMILY 188 293
IPR035979 RBD_domain_sf SUPERFAMILY 293 406
IPR000504 RRM_dom Pfam 305 368
IPR000504 RRM_dom Pfam 204 274
IPR000504 RRM_dom Pfam 111 177
IPR000504 RRM_dom ProSiteProfiles 202 281

No CAZYmes available for this sequence

No external refs found!