Sobic.004G190700.3

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG_01_0005925 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005925_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G190700.3
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G190700.3
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_324
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011016	Znf_RING-CH	ProSiteProfiles	32	92
IPR011016	Znf_RING-CH	SMART	39	86
IPR033275	MARCH-like	PANTHER	13	228
IPR013083	Znf_RING/FYVE/PHD	Gene3D	25	95
IPR022143	DUF3675	Pfam	91	209
IPR011016	Znf_RING-CH	Pfam	40	85

No CAZYmes available for this sequence

External Links

No external refs found!