Sobic.004G196101.1

Description : nitrate reductase 1

Gene families : OG_01_0001324 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001324_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G196101.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G196101.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_183
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_36

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006809	nitric oxide biosynthetic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008940	nitrate reductase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	None	Extended
MF	GO:0020037	heme binding	ISM	GOs from InterProScan
MF	GO:0030151	molybdenum ion binding	ISM	GOs from InterProScan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042126	nitrate metabolic process	None	Extended
BP	GO:0042128	nitrate assimilation	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
MF	GO:0043546	molybdopterin cofactor binding	ISM	GOs from InterProScan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046209	nitric oxide metabolic process	None	Extended
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0050463	nitrate reductase [NAD(P)H] activity	None	Extended
MF	GO:0050464	nitrate reductase (NADPH) activity	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071941	nitrogen cycle metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:2001057	reactive nitrogen species metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001199	Cyt_B5-like_heme/steroid-bd	SMART	558	630
IPR001834	CBR-like	PANTHER	74	923
IPR001433	OxRdtase_FAD/NAD-bd	Pfam	796	905
IPR000572	OxRdtase_Mopterin-bd_dom	Pfam	153	334
IPR039261	FNR_nucleotide-bd	Gene3D	772	923
IPR008333	Cbr1-like_FAD-bd_dom	Pfam	670	776
IPR036400	Cyt_B5-like_heme/steroid_sf	SUPERFAMILY	555	629
IPR001709	Flavoprot_Pyr_Nucl_cyt_Rdtase	PRINTS	868	884
IPR001709	Flavoprot_Pyr_Nucl_cyt_Rdtase	PRINTS	717	724
IPR001709	Flavoprot_Pyr_Nucl_cyt_Rdtase	PRINTS	589	599
IPR001709	Flavoprot_Pyr_Nucl_cyt_Rdtase	PRINTS	892	900
IPR001709	Flavoprot_Pyr_Nucl_cyt_Rdtase	PRINTS	795	814
IPR001709	Flavoprot_Pyr_Nucl_cyt_Rdtase	PRINTS	822	831
IPR001709	Flavoprot_Pyr_Nucl_cyt_Rdtase	PRINTS	834	845
IPR039261	FNR_nucleotide-bd	SUPERFAMILY	789	918
IPR017938	Riboflavin_synthase-like_b-brl	SUPERFAMILY	666	776
IPR001199	Cyt_B5-like_heme/steroid-bd	Pfam	559	629
IPR014756	Ig_E-set	SUPERFAMILY	366	493
IPR012137	Nitr_rd_NADH	PIRSF	37	923
IPR036374	OxRdtase_Mopterin-bd_sf	Gene3D	103	356
IPR005066	MoCF_OxRdtse_dimer	Pfam	362	493
IPR036400	Cyt_B5-like_heme/steroid_sf	Gene3D	548	633
IPR017927	FAD-bd_FR_type	ProSiteProfiles	665	777
IPR001199	Cyt_B5-like_heme/steroid-bd	PRINTS	617	629
IPR001199	Cyt_B5-like_heme/steroid-bd	PRINTS	580	590
IPR001199	Cyt_B5-like_heme/steroid-bd	PRINTS	590	604
IPR001199	Cyt_B5-like_heme/steroid-bd	PRINTS	605	612
IPR022407	OxRdtase_Mopterin_BS	ProSitePatterns	169	205
IPR008335	Mopterin_OxRdtase_euk	PRINTS	461	473
IPR008335	Mopterin_OxRdtase_euk	PRINTS	409	421
IPR008335	Mopterin_OxRdtase_euk	PRINTS	280	296
IPR008335	Mopterin_OxRdtase_euk	PRINTS	205	217
IPR008335	Mopterin_OxRdtase_euk	PRINTS	119	133
IPR008335	Mopterin_OxRdtase_euk	PRINTS	297	310
IPR008335	Mopterin_OxRdtase_euk	PRINTS	220	235
IPR008335	Mopterin_OxRdtase_euk	PRINTS	474	487
IPR008335	Mopterin_OxRdtase_euk	PRINTS	364	376
IPR008335	Mopterin_OxRdtase_euk	PRINTS	141	157
IPR008335	Mopterin_OxRdtase_euk	PRINTS	436	446
IPR008335	Mopterin_OxRdtase_euk	PRINTS	313	326
IPR008335	Mopterin_OxRdtase_euk	PRINTS	395	409
IPR008335	Mopterin_OxRdtase_euk	PRINTS	194	205
IPR036374	OxRdtase_Mopterin-bd_sf	SUPERFAMILY	101	364
IPR018506	Cyt_B5_heme-BS	ProSitePatterns	586	593
IPR001199	Cyt_B5-like_heme/steroid-bd	ProSiteProfiles	555	630

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.004G196101.1

Expression Profile

Co-expression Networks

Functional Annotation