Sobic.004G197200.1

Description : fimbrin-like protein 2

Gene families : OG_01_0000698 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000698_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G197200.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G197200.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_106

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0007015	actin filament organization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0051015	actin filament binding	ISM	GOs from InterProScan
BP	GO:0051017	actin filament bundle assembly	ISM	GOs from InterProScan
BP	GO:0061572	actin filament bundle organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001715	CH_dom	CDD	127	241
IPR001715	CH_dom	Pfam	275	374
IPR001715	CH_dom	Pfam	399	501
IPR001715	CH_dom	Pfam	522	622
IPR001715	CH_dom	Pfam	128	240
IPR036872	CH_dom_sf	Gene3D	511	623
IPR036872	CH_dom_sf	Gene3D	393	510
IPR001715	CH_dom	CDD	519	626
IPR001715	CH_dom	ProSiteProfiles	126	243
IPR001715	CH_dom	SMART	275	374
IPR001715	CH_dom	SMART	399	501
IPR001715	CH_dom	SMART	128	241
IPR001715	CH_dom	SMART	520	624
IPR036872	CH_dom_sf	SUPERFAMILY	124	623
IPR036872	CH_dom_sf	Gene3D	122	248
IPR001715	CH_dom	ProSiteProfiles	518	626
IPR039959	Fimbrin/Plastin	PANTHER	1	671
IPR001715	CH_dom	ProSiteProfiles	273	376
IPR001715	CH_dom	CDD	398	501
IPR001715	CH_dom	ProSiteProfiles	397	503
IPR001715	CH_dom	CDD	275	373
IPR036872	CH_dom_sf	Gene3D	249	379

No CAZYmes available for this sequence

External Links

No external refs found!