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  5. Sevir.8G203300.1

Sevir.8G203300.1


Description : 20S proteasome alpha subunit E1


Gene families : OG_01_0002256 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002256_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G203300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G203300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_22
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_107


Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex ISM GOs from InterProScan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISM GOs from InterProScan
CC GO:0019773 proteasome core complex, alpha-subunit complex ISM GOs from InterProScan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process ISM GOs from InterProScan
BP GO:0051603 proteolysis involved in protein catabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR033812 Proteasome_alpha_type_5 CDD 8 218
IPR029055 Ntn_hydrolases_N SUPERFAMILY 7 234
IPR001353 Proteasome_sua/b Pfam 31 218
IPR000426 Proteasome_asu_N ProSitePatterns 8 30
IPR029055 Ntn_hydrolases_N Gene3D 1 237
IPR023332 Proteasome_alpha-type ProSiteProfiles 23 234
IPR000426 Proteasome_asu_N Pfam 8 30
IPR000426 Proteasome_asu_N SMART 8 30

No CAZYmes available for this sequence

No external refs found!