Sobic.004G205000.1

Description : nucleotide binding protein 35

Gene families : OG_01_0007079 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007079_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G205000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G205000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_273
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_153

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	ISM	GOs from InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	ISM	GOs from InterProScan
MF	GO:0051539	4 iron, 4 sulfur cluster binding	ISM	GOs from InterProScan
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR028601	NUBP1/Nbp35	Hamap	51	388
IPR027417	P-loop_NTPase	SUPERFAMILY	89	365
IPR033756	YlxH/NBP35	Pfam	322	384
IPR033756	YlxH/NBP35	Pfam	102	285
IPR019591	Mrp/NBP35_ATP-bd	Hamap	97	385
IPR027417	P-loop_NTPase	Gene3D	98	388
IPR000808	Mrp-like_CS	ProSitePatterns	210	226
IPR019591	Mrp/NBP35_ATP-bd	PANTHER	42	387

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.004G205000.1

Expression Profile

Co-expression Networks

Functional Annotation