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  5. Sobic.004G213600.4

Sobic.004G213600.4


Description : Leucine-rich repeat family protein


Gene families : OG_01_0001347 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001347_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G213600.4
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G213600.4
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_301
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_2


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR026906 LRR_5 Pfam 403 511
IPR032675 LRR_dom_sf Gene3D 225 303
IPR032675 LRR_dom_sf Gene3D 304 390
IPR032675 LRR_dom_sf Gene3D 92 224
IPR032675 LRR_dom_sf Gene3D 391 570
IPR001611 Leu-rich_rpt Pfam 259 318
IPR001611 Leu-rich_rpt Pfam 185 207
IPR001611 Leu-rich_rpt Pfam 381 400
IPR001611 Leu-rich_rpt Pfam 234 253
IPR001611 Leu-rich_rpt Pfam 356 375
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 524 547
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 233 258
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 498 523
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 184 209
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 426 450
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 378 402
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 282 306
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 259 281

No CAZYmes available for this sequence

No external refs found!