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  5. Sobic.004G213800.1

Sobic.004G213800.1


Description : TRAF-like family protein


Gene families : OG_01_0006043 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006043_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G213800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G213800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_105
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_177


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002083 MATH/TRAF_dom CDD 383 518
IPR002083 MATH/TRAF_dom ProSiteProfiles 40 176
IPR002083 MATH/TRAF_dom CDD 190 346
IPR002083 MATH/TRAF_dom ProSiteProfiles 382 518
IPR002083 MATH/TRAF_dom ProSiteProfiles 552 676
IPR002083 MATH/TRAF_dom CDD 553 676
IPR002083 MATH/TRAF_dom CDD 42 156
IPR008974 TRAF-like Gene3D 373 527
IPR008974 TRAF-like Gene3D 545 679
IPR008974 TRAF-like Gene3D 27 183
IPR008974 TRAF-like Gene3D 184 354
IPR002083 MATH/TRAF_dom ProSiteProfiles 189 346
IPR002083 MATH/TRAF_dom SMART 387 499
IPR002083 MATH/TRAF_dom SMART 557 657
IPR002083 MATH/TRAF_dom Pfam 414 520
IPR002083 MATH/TRAF_dom Pfam 564 676
IPR002083 MATH/TRAF_dom Pfam 57 177

No CAZYmes available for this sequence

No external refs found!