Sobic.004G215600.1

Description : ATP binding;ATP-dependent helicases;DNA helicases

Gene families : OG_01_0004226 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004226_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G215600.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G215600.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_181
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001650	Helicase_C	SMART	322	419
IPR014001	Helicase_ATP-bd	ProSiteProfiles	38	233
IPR036388	WH-like_DNA-bd_sf	Gene3D	449	534
IPR027417	P-loop_NTPase	Gene3D	20	240
IPR004179	Sec63-dom	Pfam	538	850
IPR001650	Helicase_C	Pfam	267	418
IPR001650	Helicase_C	ProSiteProfiles	263	464
IPR027417	P-loop_NTPase	SUPERFAMILY	19	230
IPR027417	P-loop_NTPase	Gene3D	241	442
IPR014001	Helicase_ATP-bd	SMART	25	245
IPR027417	P-loop_NTPase	SUPERFAMILY	235	443
IPR004179	Sec63-dom	SMART	538	854
IPR011545	DEAD/DEAH_box_helicase_dom	Pfam	32	219

No CAZYmes available for this sequence

External Links

No external refs found!