Sobic.004G218000.5

Description : SET-domain containing protein lysine methyltransferase family protein

Gene families : OG_01_0019540 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019540_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G218000.5
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G218000.5
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_42
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_213

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	ISM	GOs from InterProScan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	ISM	GOs from InterProScan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007728	Pre-SET_dom	ProSiteProfiles	402	499
IPR001214	SET_dom	Pfam	514	642
IPR001214	SET_dom	SMART	502	649
IPR018848	WIYLD_domain	Pfam	6	63
IPR043017	WIYLD_dom_sf	Gene3D	2	63
IPR007728	Pre-SET_dom	Pfam	346	494
IPR025776	SUVR4/1/2	ProSiteProfiles	1	676
IPR001214	SET_dom	ProSiteProfiles	502	643
IPR007728	Pre-SET_dom	SMART	343	486

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.004G218000.5

Expression Profile

Co-expression Networks

Functional Annotation