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  5. Sobic.004G218700.1

Sobic.004G218700.1


Description : Long-chain fatty alcohol dehydrogenase family protein


Gene families : OG_01_0001033 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001033_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G218700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G218700.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_47


Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors ISM GOs from InterProScan
MF GO:0046577 long-chain-alcohol oxidase activity ISM GOs from InterProScan
MF GO:0050660 flavin adenine dinucleotide binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000172 GMC_OxRdtase_N Pfam 259 527
IPR036188 FAD/NAD-bd_sf SUPERFAMILY 256 766
IPR007867 GMC_OxRtase_C Pfam 621 754
IPR012400 Long_Oxdase PIRSF 12 767
IPR036188 FAD/NAD-bd_sf Gene3D 242 551
IPR036188 FAD/NAD-bd_sf Gene3D 660 762
HMM Family HMM Length Query Length e-Value Query Start Query End
AA3 618 774 2.1e-43 255 764
No external refs found!