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  5. Sobic.004G236300.1

Sobic.004G236300.1


Description : shikimate kinase 1


Gene families : OG_01_0003242 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003242_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G236300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G236300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_45
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_88


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000623 Shikimate_kinase/TSH1 Hamap 118 303
IPR027417 P-loop_NTPase SUPERFAMILY 119 241
IPR027417 P-loop_NTPase Gene3D 103 315
IPR031322 Shikimate/glucono_kinase Pfam 127 280
IPR023000 Shikimate_kinase_CS ProSitePatterns 175 200
IPR000623 Shikimate_kinase/TSH1 CDD 121 281

No CAZYmes available for this sequence

No external refs found!