Sobic.004G243400.1

Description : Copper amine oxidase family protein

Gene families : OG_01_0000229 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000229_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G243400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G243400.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_134
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_178

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008131	primary amine oxidase activity	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	None	Extended
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048038	quinone binding	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015802	Cu_amine_oxidase_N3	Pfam	122	219
IPR016182	Cu_amine_oxidase_N-reg	SUPERFAMILY	24	114
IPR000269	Cu_amine_oxidase	ProSitePatterns	639	652
IPR036460	Cu_amine_oxidase_C_sf	SUPERFAMILY	236	682
IPR000269	Cu_amine_oxidase	PANTHER	1	695
IPR015800	Cu_amine_oxidase_N2	Pfam	26	106
IPR015798	Cu_amine_oxidase_C	Pfam	249	674
IPR016182	Cu_amine_oxidase_N-reg	SUPERFAMILY	120	231
IPR036460	Cu_amine_oxidase_C_sf	Gene3D	242	685

No CAZYmes available for this sequence

External Links

No external refs found!