Sobic.004G245000.1

Description : CHASE domain containing histidine kinase protein

Gene families : OG_01_0002185 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002185_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G245000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G245000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_187

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	ISM	GOs from InterProScan
BP	GO:0000160	phosphorelay signal transduction system	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM	GOs from InterProScan
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR042240	CHASE_sf	Gene3D	90	304
IPR003661	HisK_dim/P	SMART	358	423
IPR001789	Sig_transdc_resp-reg_receiver	SMART	828	961
IPR006189	CHASE_dom	ProSiteProfiles	86	297
IPR001789	Sig_transdc_resp-reg_receiver	ProSiteProfiles	829	965
IPR036890	HATPase_C_sf	SUPERFAMILY	412	649
IPR003661	HisK_dim/P	Pfam	358	423
IPR036890	HATPase_C_sf	Gene3D	422	657
IPR003594	HATPase_C	SMART	470	654
IPR001789	Sig_transdc_resp-reg_receiver	Pfam	830	961
IPR006189	CHASE_dom	Pfam	89	269
IPR000836	PRibTrfase_dom	CDD	778	854
IPR036097	HisK_dim/P_sf	SUPERFAMILY	345	424
IPR011006	CheY-like_superfamily	SUPERFAMILY	827	964
IPR003594	HATPase_C	Pfam	470	652
IPR004358	Sig_transdc_His_kin-like_C	PRINTS	597	607
IPR004358	Sig_transdc_His_kin-like_C	PRINTS	579	593
IPR004358	Sig_transdc_His_kin-like_C	PRINTS	638	651
IPR004358	Sig_transdc_His_kin-like_C	PRINTS	614	632
IPR003661	HisK_dim/P	CDD	358	419
IPR006189	CHASE_dom	SMART	86	271
IPR005467	His_kinase_dom	ProSiteProfiles	365	654

No CAZYmes available for this sequence

External Links

No external refs found!