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  5. Sobic.004G248100.1

Sobic.004G248100.1


Description : glycosyl hydrolase 9B1


Gene families : OG_01_0005259 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005259_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.004G248100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.004G248100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_15
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_156


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012341 6hp_glycosidase-like_sf Gene3D 29 500
IPR033126 Glyco_hydro_9_Asp/Glu_AS ProSitePatterns 465 483
IPR008928 6-hairpin_glycosidase_sf SUPERFAMILY 31 496
IPR018221 Glyco_hydro_9_His_AS ProSitePatterns 391 417
IPR001701 Glyco_hydro_9 Pfam 34 489
HMM Family HMM Length Query Length e-Value Query Start Query End
GH9 418 505 1.5e-133 33 490
No external refs found!